Carnation DB

Dca55017.1

Annotation

8-exons
f-1
sp|B9HI10_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_873612#GO:0004252;GO:0006508#1F1P0C
Os05t0417100-01 Peptidase S1C, HrtA/DegP2/Q/S family protein.
Repeat List (scaffold76)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55017.1	104	588	590	67.28	485	81	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HI10_POPTR	97	584	587	83.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55017.1	105	576	590	66.1	472	83	0
Target_name	Start	End	Length	Cov(%)
Os05t0417100-01	124	595	615	76.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold76	Augustus	mRNA	271939	276084	.	-	.	ID=Dca55017.1;Parent=Dca55017
scaffold76	Augustus	exon	271939	272190	.	-	.	ID=Dca55017.1.exon1;Parent=Dca55017.1
scaffold76	Augustus	exon	272480	272530	.	-	.	ID=Dca55017.1.exon2;Parent=Dca55017.1
scaffold76	Augustus	exon	272617	272820	.	-	.	ID=Dca55017.1.exon3;Parent=Dca55017.1
scaffold76	Augustus	exon	272963	273090	.	-	.	ID=Dca55017.1.exon4;Parent=Dca55017.1
scaffold76	Augustus	exon	273296	273555	.	-	.	ID=Dca55017.1.exon5;Parent=Dca55017.1
scaffold76	Augustus	exon	273760	273955	.	-	.	ID=Dca55017.1.exon6;Parent=Dca55017.1
scaffold76	Augustus	exon	274041	274286	.	-	.	ID=Dca55017.1.exon7;Parent=Dca55017.1
scaffold76	Augustus	exon	275649	276084	.	-	.	ID=Dca55017.1.exon8;Parent=Dca55017.1