Carnation DB

Dca5502.1

Annotation

7-exons
f-1
sp|B9RAH4_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1506540#unknown#0F0P0C
Repeat List (scaffold1210)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5502.1	1	232	232	90.51	232	91	7e-125
Target_name	Start	End	Length	Cov(%)
sp\|B9RAH4_RICCO	1	232	232	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5502.1	1	232	232	87.5	232	88	3e-122
Target_name	Start	End	Length	Cov(%)
Os07t0295200-01	1	232	233	99.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1210	Augus-PASA	mRNA	64294	67732	.	+	.	ID=Dca5502.1;Parent=Dca5502
scaffold1210	Augus-PASA	exon	64294	64408	.	+	.	ID=Dca5502.1.exon1;Parent=Dca5502.1
scaffold1210	Augus-PASA	exon	64839	64953	.	+	.	ID=Dca5502.1.exon2;Parent=Dca5502.1
scaffold1210	Augus-PASA	exon	65606	65759	.	+	.	ID=Dca5502.1.exon3;Parent=Dca5502.1
scaffold1210	Augus-PASA	exon	66033	66129	.	+	.	ID=Dca5502.1.exon4;Parent=Dca5502.1
scaffold1210	Augus-PASA	exon	67009	67097	.	+	.	ID=Dca5502.1.exon5;Parent=Dca5502.1
scaffold1210	Augus-PASA	exon	67170	67238	.	+	.	ID=Dca5502.1.exon6;Parent=Dca5502.1
scaffold1210	Augus-PASA	exon	67673	67732	.	+	.	ID=Dca5502.1.exon7;Parent=Dca5502.1