Carnation DB

Dca55027.1

Annotation

5-exons
f-1
sp|B9RC75_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1686040#unknown#0F0P0C
Repeat List (scaffold76)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55027.1	73	293	295	29.49	221	39	1e-32
Target_name	Start	End	Length	Cov(%)
sp\|B9RC75_RICCO	179	399	407	54.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55027.1	72	294	295	26.1	223	33	3e-27
Target_name	Start	End	Length	Cov(%)
Os07t0573400-02	193	423	431	53.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold76	Augustus	mRNA	345514	348417	.	-	.	ID=Dca55027.1;Parent=Dca55027
scaffold76	Augustus	exon	345514	345879	.	-	.	ID=Dca55027.1.exon1;Parent=Dca55027.1
scaffold76	Augustus	exon	345979	346113	.	-	.	ID=Dca55027.1.exon2;Parent=Dca55027.1
scaffold76	Augustus	exon	346231	346284	.	-	.	ID=Dca55027.1.exon3;Parent=Dca55027.1
scaffold76	Augustus	exon	347997	348152	.	-	.	ID=Dca55027.1.exon4;Parent=Dca55027.1
scaffold76	Augustus	exon	348241	348417	.	-	.	ID=Dca55027.1.exon5;Parent=Dca55027.1