Carnation DB

Dca55065.1

Annotation

13-exons
f-1
sp|D7SIB2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g06230#GO:0008270#1F0P0C
sp|B9RLY9_RICCO#Membrane associated ring finger 1,8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1472160#GO:0008270#1F0P0C
Repeat List (scaffold761)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55065.1	438	510	545	8.62	73	64	9e-20
Target_name	Start	End	Length	Cov(%)
sp\|D7SIB2_VITVI	116	189	291	25.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55065.1	438	510	545	7.33	73	55	5e-13
Target_name	Start	End	Length	Cov(%)
AT3G47550.3	113	185	288	25.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold761	Augustus	mRNA	8831	15411	.	+	.	ID=Dca55065.1;Parent=Dca55065
scaffold761	Augustus	exon	8831	9100	.	+	.	ID=Dca55065.1.exon1;Parent=Dca55065.1
scaffold761	Augustus	exon	9390	9461	.	+	.	ID=Dca55065.1.exon2;Parent=Dca55065.1
scaffold761	Augus-PASA	exon	10990	11304	.	+	.	ID=Dca55065.1.exon3;Parent=Dca55065.1
scaffold761	Augustus	exon	11595	11666	.	+	.	ID=Dca55065.1.exon4;Parent=Dca55065.1
scaffold761	Augustus	exon	11802	11866	.	+	.	ID=Dca55065.1.exon5;Parent=Dca55065.1
scaffold761	Augustus	exon	11994	12147	.	+	.	ID=Dca55065.1.exon6;Parent=Dca55065.1
scaffold761	Augustus	exon	12690	12773	.	+	.	ID=Dca55065.1.exon7;Parent=Dca55065.1
scaffold761	Augustus	exon	12875	12964	.	+	.	ID=Dca55065.1.exon8;Parent=Dca55065.1
scaffold761	Augustus	exon	13496	13592	.	+	.	ID=Dca55065.1.exon9;Parent=Dca55065.1
scaffold761	Augustus	exon	14153	14180	.	+	.	ID=Dca55065.1.exon10;Parent=Dca55065.1
scaffold761	Augustus	exon	14519	14594	.	+	.	ID=Dca55065.1.exon11;Parent=Dca55065.1
scaffold761	Augustus	exon	14968	15032	.	+	.	ID=Dca55065.1.exon12;Parent=Dca55065.1
scaffold761	Augustus	exon	15162	15411	.	+	.	ID=Dca55065.1.exon13;Parent=Dca55065.1