Carnation DB

Dca5511.1

Annotation

12-exons
f-1
sp|D7SU36_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g02670#GO:0003913;GO:0006281#1F1P0C
AT5G24850.1 | Symbols: CRY3 | cryptochrome 3 | chr5:8535399-8538016 REVERSE LENGTH=526
Repeat List (scaffold12107)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5511.1	4	498	505	68.71	495	65	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SU36_VITVI	51	581	586	90.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5511.1	4	504	505	66.33	501	63	0
Target_name	Start	End	Length	Cov(%)
AT5G24850.1	2	522	526	99.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12107	Augustus	mRNA	1302	4277	.	+	.	ID=Dca5511.1;Parent=Dca5511
scaffold12107	Augustus	exon	1302	1587	.	+	.	ID=Dca5511.1.exon1;Parent=Dca5511.1
scaffold12107	Augustus	exon	1714	1853	.	+	.	ID=Dca5511.1.exon2;Parent=Dca5511.1
scaffold12107	Augustus	exon	1937	2134	.	+	.	ID=Dca5511.1.exon3;Parent=Dca5511.1
scaffold12107	Augustus	exon	2218	2343	.	+	.	ID=Dca5511.1.exon4;Parent=Dca5511.1
scaffold12107	Augustus	exon	2422	2496	.	+	.	ID=Dca5511.1.exon5;Parent=Dca5511.1
scaffold12107	Augustus	exon	2582	2655	.	+	.	ID=Dca5511.1.exon6;Parent=Dca5511.1
scaffold12107	Augustus	exon	2904	2980	.	+	.	ID=Dca5511.1.exon7;Parent=Dca5511.1
scaffold12107	Augustus	exon	3134	3209	.	+	.	ID=Dca5511.1.exon8;Parent=Dca5511.1
scaffold12107	Augustus	exon	3319	3388	.	+	.	ID=Dca5511.1.exon9;Parent=Dca5511.1
scaffold12107	Augustus	exon	3504	3627	.	+	.	ID=Dca5511.1.exon10;Parent=Dca5511.1
scaffold12107	Augustus	exon	3751	3800	.	+	.	ID=Dca5511.1.exon11;Parent=Dca5511.1
scaffold12107	Augustus	exon	4056	4277	.	+	.	ID=Dca5511.1.exon12;Parent=Dca5511.1