Carnation DB

Dca55112.1

Annotation

5-exons
f-1
sp|D7SYP2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0220g00030#GO:0005634;GO:0006396#0F1P1C
Os11t0657300-01 Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).
Repeat List (scaffold7625)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55112.1	1	88	88	89.77	88	90	2e-40
Target_name	Start	End	Length	Cov(%)
sp\|D7SYP2_VITVI	1	88	88	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55112.1	1	86	88	87.5	86	90	3e-40
Target_name	Start	End	Length	Cov(%)
Os11t0657300-01	1	86	87	98.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7625	Augustus	mRNA	5499	6832	.	+	.	ID=Dca55112.1;Parent=Dca55112
scaffold7625	Augustus	exon	5499	5504	.	+	.	ID=Dca55112.1.exon1;Parent=Dca55112.1
scaffold7625	Augustus	exon	5681	5768	.	+	.	ID=Dca55112.1.exon2;Parent=Dca55112.1
scaffold7625	Augustus	exon	5935	5972	.	+	.	ID=Dca55112.1.exon3;Parent=Dca55112.1
scaffold7625	Augustus	exon	6074	6138	.	+	.	ID=Dca55112.1.exon4;Parent=Dca55112.1
scaffold7625	Augustus	exon	6763	6832	.	+	.	ID=Dca55112.1.exon5;Parent=Dca55112.1