Dca55134.1
Annotation
- 4-exons
- f-1
- sp|F6HE14_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g00420#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- sp|B9RZX1_RICCO#Polygalacturonase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1002690#GO:0005576;GO:0047911;GO:0004650;GO:0005975;GO:0007047#2F2P1C
- Repeat List (scaffold7631)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55134.1 |
24 |
198 |
375 |
28.8 |
175 |
62 |
6e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HE14_VITVI |
24 |
199 |
477 |
36.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55134.1 |
1 |
242 |
375 |
31.73 |
242 |
49 |
2e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G48100.1 |
1 |
230 |
475 |
48.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7631 |
Augustus |
mRNA |
7073 |
13694 |
. |
+ |
. |
ID=Dca55134.1;Parent=Dca55134 |
| scaffold7631 |
Augustus |
exon |
7073 |
7498 |
. |
+ |
. |
ID=Dca55134.1.exon1;Parent=Dca55134.1 |
| scaffold7631 |
Augustus |
exon |
8815 |
8982 |
. |
+ |
. |
ID=Dca55134.1.exon2;Parent=Dca55134.1 |
| scaffold7631 |
Augustus |
exon |
12986 |
13014 |
. |
+ |
. |
ID=Dca55134.1.exon3;Parent=Dca55134.1 |
| scaffold7631 |
Augustus |
exon |
13190 |
13694 |
. |
+ |
. |
ID=Dca55134.1.exon4;Parent=Dca55134.1 |
