Dca55228.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold766)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55228.1 |
98 |
541 |
585 |
31.79 |
444 |
39 |
3e-66
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
153 |
617 |
1717 |
27.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55228.1 |
426 |
518 |
585 |
5.64 |
93 |
36 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold766 |
Augustus |
mRNA |
28676 |
33158 |
. |
- |
. |
ID=Dca55228.1;Parent=Dca55228 |
| scaffold766 |
Augustus |
exon |
28676 |
28812 |
. |
- |
. |
ID=Dca55228.1.exon1;Parent=Dca55228.1 |
| scaffold766 |
Augustus |
exon |
31201 |
32579 |
. |
- |
. |
ID=Dca55228.1.exon2;Parent=Dca55228.1 |
| scaffold766 |
Augustus |
exon |
32917 |
33158 |
. |
- |
. |
ID=Dca55228.1.exon3;Parent=Dca55228.1 |
