Dca55240.1
Annotation
- 2-exons
- f-1
- sp|H2KWP6_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g25734#unknown#0F0P0C
- Repeat List (scaffold7664)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55240.1 |
33 |
805 |
817 |
47.49 |
773 |
49 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|H2KWP6_ORYSJ |
211 |
931 |
932 |
77.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55240.1 |
8 |
802 |
817 |
35.37 |
795 |
34 |
8e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
555 |
1384 |
1401 |
59.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7664 |
Augustus |
mRNA |
8015 |
10611 |
. |
+ |
. |
ID=Dca55240.1;Parent=Dca55240 |
| scaffold7664 |
Augustus |
exon |
8015 |
9679 |
. |
+ |
. |
ID=Dca55240.1.exon1;Parent=Dca55240.1 |
| scaffold7664 |
Augustus |
exon |
9823 |
10611 |
. |
+ |
. |
ID=Dca55240.1.exon2;Parent=Dca55240.1 |
