Dca55268.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7673)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55268.1 |
85 |
774 |
778 |
48.84 |
690 |
47 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
240 |
1046 |
1501 |
53.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55268.1 |
163 |
697 |
778 |
25.19 |
535 |
33 |
1e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
11 |
612 |
707 |
85.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7673 |
Augustus |
mRNA |
14590 |
17410 |
. |
+ |
. |
ID=Dca55268.1;Parent=Dca55268 |
| scaffold7673 |
Augustus |
exon |
14590 |
14842 |
. |
+ |
. |
ID=Dca55268.1.exon1;Parent=Dca55268.1 |
| scaffold7673 |
Augustus |
exon |
15069 |
16297 |
. |
+ |
. |
ID=Dca55268.1.exon2;Parent=Dca55268.1 |
| scaffold7673 |
Augustus |
exon |
16421 |
17005 |
. |
+ |
. |
ID=Dca55268.1.exon3;Parent=Dca55268.1 |
| scaffold7673 |
Augustus |
exon |
17141 |
17410 |
. |
+ |
. |
ID=Dca55268.1.exon4;Parent=Dca55268.1 |
