Carnation DB

Dca55278.1

Annotation

5-exons
f-1
sp|E9NM92_DIACA#RTE1-like protein 1#Dianthus caryophyllus (Carnation) (Clove pink)#Name=RTH1#unknown#0F0P0C
Repeat List (scaffold768)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55278.1	256	482	483	33.54	227	70	4e-86
Target_name	Start	End	Length	Cov(%)
sp\|E9NM92_DIACA	1	232	233	99.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55278.1	2	232	483	24.22	231	50	6e-60
Target_name	Start	End	Length	Cov(%)
AT3G51040.1	3	230	231	98.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold768	Augustus	mRNA	29763	34877	.	-	.	ID=Dca55278.1;Parent=Dca55278
scaffold768	Augustus	exon	29763	30182	.	-	.	ID=Dca55278.1.exon1;Parent=Dca55278.1
scaffold768	Augustus	exon	30660	30935	.	-	.	ID=Dca55278.1.exon2;Parent=Dca55278.1
scaffold768	Augustus	exon	32083	32143	.	-	.	ID=Dca55278.1.exon3;Parent=Dca55278.1
scaffold768	Augustus	exon	33875	34299	.	-	.	ID=Dca55278.1.exon4;Parent=Dca55278.1
scaffold768	Augustus	exon	34608	34877	.	-	.	ID=Dca55278.1.exon5;Parent=Dca55278.1