Dca55311.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold769)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55311.1 |
163 |
206 |
330 |
8.48 |
44 |
64 |
7e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
802 |
845 |
1501 |
2.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55311.1 |
36 |
162 |
330 |
16.06 |
127 |
42 |
3e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
217 |
343 |
707 |
17.96 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold769 |
Augustus |
mRNA |
85971 |
87716 |
. |
+ |
. |
ID=Dca55311.1;Parent=Dca55311 |
| scaffold769 |
Augustus |
exon |
85971 |
86455 |
. |
+ |
. |
ID=Dca55311.1.exon1;Parent=Dca55311.1 |
| scaffold769 |
Augustus |
exon |
86904 |
87036 |
. |
+ |
. |
ID=Dca55311.1.exon2;Parent=Dca55311.1 |
| scaffold769 |
Augustus |
exon |
87342 |
87716 |
. |
+ |
. |
ID=Dca55311.1.exon3;Parent=Dca55311.1 |
