Dca55320.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7696)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55320.1 |
57 |
255 |
255 |
48.62 |
199 |
63 |
4e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
38 |
236 |
964 |
20.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55320.1 |
98 |
254 |
255 |
22.74 |
157 |
37 |
5e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
649 |
1428 |
11.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7696 |
Augustus |
mRNA |
9864 |
10948 |
. |
+ |
. |
ID=Dca55320.1;Parent=Dca55320 |
| scaffold7696 |
Augustus |
exon |
9864 |
10022 |
. |
+ |
. |
ID=Dca55320.1.exon1;Parent=Dca55320.1 |
| scaffold7696 |
Augustus |
exon |
10340 |
10948 |
. |
+ |
. |
ID=Dca55320.1.exon2;Parent=Dca55320.1 |
