Carnation DB

Dca55339.1

Annotation

14-exons
f-1
sp|B9HI47_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_832627#GO:0051287;GO:0050661;GO:0016620;GO:0006006#3F1P0C
AT1G79530.1 | Symbols: GAPCP-1 | glyceraldehyde-3-phosphate dehydrogenase of plastid 1 | chr1:29916232-29919088 REVERSE LENGTH=422
Repeat List (scaffold77)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55339.1	1	421	422	79.62	421	79	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HI47_POPTR	1	420	422	99.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55339.1	1	422	422	77.72	422	77	0
Target_name	Start	End	Length	Cov(%)
AT1G79530.1	1	421	422	99.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold77	Augus-PASA	mRNA	123531	128586	.	-	.	ID=Dca55339.1;Parent=Dca55339
scaffold77	Augus-PASA	exon	123531	123582	.	-	.	ID=Dca55339.1.exon1;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	123720	123809	.	-	.	ID=Dca55339.1.exon2;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	124594	124677	.	-	.	ID=Dca55339.1.exon3;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	124895	125037	.	-	.	ID=Dca55339.1.exon4;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	125165	125262	.	-	.	ID=Dca55339.1.exon5;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	125395	125455	.	-	.	ID=Dca55339.1.exon6;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	126049	126195	.	-	.	ID=Dca55339.1.exon7;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	126303	126402	.	-	.	ID=Dca55339.1.exon8;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	126508	126620	.	-	.	ID=Dca55339.1.exon9;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	126724	126824	.	-	.	ID=Dca55339.1.exon10;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	127611	127649	.	-	.	ID=Dca55339.1.exon11;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	127747	127814	.	-	.	ID=Dca55339.1.exon12;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	128102	128196	.	-	.	ID=Dca55339.1.exon13;Parent=Dca55339.1
scaffold77	Augus-PASA	exon	128509	128586	.	-	.	ID=Dca55339.1.exon14;Parent=Dca55339.1