Dca55348.1
Annotation
- 3-exons
- f-1
- sp|B9H631_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_760317#GO:0005488#1F0P0C
- AT1G56090.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:20977989-20979185 REVERSE LENGTH=272
- Repeat List (scaffold77)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55348.1 |
7 |
250 |
254 |
58.26 |
244 |
55 |
1e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H631_POPTR |
3 |
256 |
256 |
99.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55348.1 |
2 |
254 |
254 |
57.87 |
253 |
54 |
6e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G56090.1 |
4 |
272 |
272 |
98.89 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold77 |
Augustus |
mRNA |
187542 |
190657 |
. |
- |
. |
ID=Dca55348.1;Parent=Dca55348 |
| scaffold77 |
Augustus |
exon |
187542 |
187937 |
. |
- |
. |
ID=Dca55348.1.exon1;Parent=Dca55348.1 |
| scaffold77 |
Augus-PASA |
exon |
188750 |
188938 |
. |
- |
. |
ID=Dca55348.1.exon2;Parent=Dca55348.1 |
| scaffold77 |
Augus-PASA |
exon |
190478 |
190657 |
. |
- |
. |
ID=Dca55348.1.exon3;Parent=Dca55348.1 |
