Carnation DB

Dca55350.1

Annotation

8-exons
f-1
sp|B9HLL2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_563741#GO:0030145#1F0P0C
AT5G13570.2 | Symbols: DCP2 | decapping 2 | chr5:4367532-4369992 FORWARD LENGTH=386
Repeat List (scaffold77)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55350.1	1	321	321	80.68	321	81	4e-152
Target_name	Start	End	Length	Cov(%)
sp\|B9HLL2_POPTR	1	322	322	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55350.1	1	321	321	70.71	321	59	3e-123
Target_name	Start	End	Length	Cov(%)
AT5G13570.2	1	386	386	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold77	Augus-PASA	mRNA	196554	204548	.	+	.	ID=Dca55350.1;Parent=Dca55350
scaffold77	Augus-PASA	exon	196554	196633	.	+	.	ID=Dca55350.1.exon1;Parent=Dca55350.1
scaffold77	Augus-PASA	exon	198747	198898	.	+	.	ID=Dca55350.1.exon2;Parent=Dca55350.1
scaffold77	Augus-PASA	exon	199098	199225	.	+	.	ID=Dca55350.1.exon3;Parent=Dca55350.1
scaffold77	Augus-PASA	exon	199956	200051	.	+	.	ID=Dca55350.1.exon4;Parent=Dca55350.1
scaffold77	Augus-PASA	exon	200662	200814	.	+	.	ID=Dca55350.1.exon5;Parent=Dca55350.1
scaffold77	Augus-PASA	exon	201977	202080	.	+	.	ID=Dca55350.1.exon6;Parent=Dca55350.1
scaffold77	Augus-PASA	exon	202164	202231	.	+	.	ID=Dca55350.1.exon7;Parent=Dca55350.1
scaffold77	Augustus	exon	204364	204548	.	+	.	ID=Dca55350.1.exon8;Parent=Dca55350.1