Carnation DB

Dca55363.1

Annotation

9-exons
f-1
sp|D7SPX1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0219g00090#unknown#0F0P0C
AT3G01710.1 | Symbols: | TPX2 (targeting protein for Xklp2) protein family | chr3:259952-261738 REVERSE LENGTH=391
Repeat List (scaffold77)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55363.1	1	497	499	40.88	497	38	9e-61
Target_name	Start	End	Length	Cov(%)
sp\|D7SPX1_VITVI	1	539	567	95.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55363.1	1	100	499	10.62	100	53	2e-23
Target_name	Start	End	Length	Cov(%)
AT3G27350.2	1	96	319	30.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold77	Augus-PASA	mRNA	304244	307590	.	+	.	ID=Dca55363.1;Parent=Dca55363
scaffold77	Augus-PASA	exon	304244	304318	.	+	.	ID=Dca55363.1.exon1;Parent=Dca55363.1
scaffold77	Augus-PASA	exon	304924	305502	.	+	.	ID=Dca55363.1.exon2;Parent=Dca55363.1
scaffold77	Augus-PASA	exon	305591	305905	.	+	.	ID=Dca55363.1.exon3;Parent=Dca55363.1
scaffold77	Augus-PASA	exon	306154	306203	.	+	.	ID=Dca55363.1.exon4;Parent=Dca55363.1
scaffold77	Augus-PASA	exon	306295	306369	.	+	.	ID=Dca55363.1.exon5;Parent=Dca55363.1
scaffold77	Augus-PASA	exon	306580	306679	.	+	.	ID=Dca55363.1.exon6;Parent=Dca55363.1
scaffold77	Augus-PASA	exon	306763	306825	.	+	.	ID=Dca55363.1.exon7;Parent=Dca55363.1
scaffold77	Augus-PASA	exon	307109	307219	.	+	.	ID=Dca55363.1.exon8;Parent=Dca55363.1
scaffold77	Augus-PASA	exon	307459	307590	.	+	.	ID=Dca55363.1.exon9;Parent=Dca55363.1