Dca55378.1
Annotation
- 4-exons
- f-1
- sp|B9GUW8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_551583#GO:0045454#0F1P0C
- AT1G34780.1 | Symbols: ATAPRL4, APRL4 | APR-like 4 | chr1:12748835-12750124 REVERSE LENGTH=310
- Repeat List (scaffold770)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55378.1 |
1 |
311 |
319 |
57.05 |
311 |
58 |
1e-97
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GUW8_POPTR |
1 |
316 |
324 |
97.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55378.1 |
15 |
306 |
319 |
47.64 |
292 |
52 |
2e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G34780.1 |
12 |
298 |
310 |
92.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold770 |
Augustus |
mRNA |
66014 |
68714 |
. |
- |
. |
ID=Dca55378.1;Parent=Dca55378 |
| scaffold770 |
Augustus |
exon |
66014 |
66471 |
. |
- |
. |
ID=Dca55378.1.exon1;Parent=Dca55378.1 |
| scaffold770 |
Augustus |
exon |
66618 |
66742 |
. |
- |
. |
ID=Dca55378.1.exon2;Parent=Dca55378.1 |
| scaffold770 |
Augustus |
exon |
66838 |
67025 |
. |
- |
. |
ID=Dca55378.1.exon3;Parent=Dca55378.1 |
| scaffold770 |
Augustus |
exon |
68526 |
68714 |
. |
- |
. |
ID=Dca55378.1.exon4;Parent=Dca55378.1 |
