Carnation DB

Dca55379.1

Annotation

5-exons
f-1
sp|F6H0Q3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g05740#GO:0005622;GO:0003677;GO:0008270#2F0P1C
sp|B9GUW9_POPTR#Methyl binding domain protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=MBD908#GO:0005634;GO:0003677;GO:0008270#2F0P1C
Repeat List (scaffold770)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55379.1	1232	1406	1407	4.83	175	39	2e-24
Target_name	Start	End	Length	Cov(%)
sp\|F6H0Q3_VITVI	998	1165	1168	14.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55379.1	1350	1404	1407	1.49	55	39	4e-06
Target_name	Start	End	Length	Cov(%)
Os08t0485700-01	822	873	886	5.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold770	Augustus	mRNA	72298	80284	.	-	.	ID=Dca55379.1;Parent=Dca55379
scaffold770	Augustus	exon	72298	72654	.	-	.	ID=Dca55379.1.exon1;Parent=Dca55379.1
scaffold770	Augustus	exon	73264	74233	.	-	.	ID=Dca55379.1.exon2;Parent=Dca55379.1
scaffold770	Augustus	exon	74373	76102	.	-	.	ID=Dca55379.1.exon3;Parent=Dca55379.1
scaffold770	Augustus	exon	76202	76337	.	-	.	ID=Dca55379.1.exon4;Parent=Dca55379.1
scaffold770	Augustus	exon	79254	80284	.	-	.	ID=Dca55379.1.exon5;Parent=Dca55379.1