Carnation DB

Dca55409.1

Annotation

6-exons
f-1
sp|D7U0J5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g04480#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
sp|B9RKR8_RICCO#Kif4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1053050#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
Repeat List (scaffold7707)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55409.1	1	233	238	63.44	233	51	3e-65
Target_name	Start	End	Length	Cov(%)
sp\|D7U0J5_VITVI	1	291	717	40.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55409.1	78	233	238	44.95	156	65	2e-51
Target_name	Start	End	Length	Cov(%)
AT3G16060.1	97	261	684	24.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7707	Augustus	mRNA	10065	13149	.	-	.	ID=Dca55409.1;Parent=Dca55409
scaffold7707	Augustus	exon	10065	10166	.	-	.	ID=Dca55409.1.exon1;Parent=Dca55409.1
scaffold7707	Augustus	exon	10261	10338	.	-	.	ID=Dca55409.1.exon2;Parent=Dca55409.1
scaffold7707	Augus-PASA	exon	10947	11054	.	-	.	ID=Dca55409.1.exon3;Parent=Dca55409.1
scaffold7707	Augus-PASA	exon	11367	11504	.	-	.	ID=Dca55409.1.exon4;Parent=Dca55409.1
scaffold7707	Augus-PASA	exon	12330	12515	.	-	.	ID=Dca55409.1.exon5;Parent=Dca55409.1
scaffold7707	Augus-PASA	exon	13045	13149	.	-	.	ID=Dca55409.1.exon6;Parent=Dca55409.1