Carnation DB

Dca55539.1

Annotation

5-exons
f-1
sp|F6H2T0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g02020#GO:0004553;GO:0005975#1F1P0C
AT3G43860.1 | Symbols: AtGH9A4, GH9A4 | glycosyl hydrolase 9A4 | chr3:15707183-15709438 FORWARD LENGTH=486
Repeat List (scaffold775)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55539.1	274	388	391	17.9	115	60	6e-36
Target_name	Start	End	Length	Cov(%)
sp\|F6H2T0_VITVI	365	482	486	24.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55539.1	274	389	391	17.13	116	57	2e-35
Target_name	Start	End	Length	Cov(%)
AT3G43860.1	367	485	486	24.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold775	Augustus	mRNA	40600	43202	.	-	.	ID=Dca55539.1;Parent=Dca55539
scaffold775	Augustus	exon	40600	40923	.	-	.	ID=Dca55539.1.exon1;Parent=Dca55539.1
scaffold775	Augustus	exon	41488	41637	.	-	.	ID=Dca55539.1.exon2;Parent=Dca55539.1
scaffold775	Augustus	exon	41957	42034	.	-	.	ID=Dca55539.1.exon3;Parent=Dca55539.1
scaffold775	Augustus	exon	42120	42533	.	-	.	ID=Dca55539.1.exon4;Parent=Dca55539.1
scaffold775	Augustus	exon	42993	43202	.	-	.	ID=Dca55539.1.exon5;Parent=Dca55539.1