Dca55547.1
Annotation
- 2-exons
- f-1
- sp|F6HCV9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0194g00170#unknown#0F0P0C
- AT1G32583.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:11787351-11788103 FORWARD LENGTH=179
- Repeat List (scaffold775)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55547.1 |
62 |
162 |
163 |
43.55 |
101 |
71 |
6e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HCV9_VITVI |
73 |
173 |
174 |
58.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55547.1 |
58 |
162 |
163 |
43.55 |
105 |
64 |
4e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G32583.1 |
68 |
178 |
179 |
62.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold775 |
Augustus |
mRNA |
89343 |
89997 |
. |
+ |
. |
ID=Dca55547.1;Parent=Dca55547 |
| scaffold775 |
Augustus |
exon |
89343 |
89502 |
. |
+ |
. |
ID=Dca55547.1.exon1;Parent=Dca55547.1 |
| scaffold775 |
Augustus |
exon |
89666 |
89997 |
. |
+ |
. |
ID=Dca55547.1.exon2;Parent=Dca55547.1 |
