Carnation DB

Dca55548.1

Annotation

12-exons
f-1
sp|F6HCV6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0194g00130#GO:0005634;GO:0003677;GO:0008270;GO:0006355#2F1P1C
sp|B9SA80_RICCO#Transcriptional adaptor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0863470#GO:0005634;GO:0003677;GO:0008270;GO:0006355#2F1P1C
Repeat List (scaffold775)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55548.1	1	495	497	70.02	495	63	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HCV6_VITVI	1	558	560	99.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55548.1	1	495	497	60.16	495	60	8e-169
Target_name	Start	End	Length	Cov(%)
AT4G16420.1	1	485	487	99.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold775	Augus-PASA	mRNA	90862	95977	.	-	.	ID=Dca55548.1;Parent=Dca55548
scaffold775	Augus-PASA	exon	90862	91053	.	-	.	ID=Dca55548.1.exon1;Parent=Dca55548.1
scaffold775	Augus-PASA	exon	91177	91380	.	-	.	ID=Dca55548.1.exon2;Parent=Dca55548.1
scaffold775	Augus-PASA	exon	92257	92467	.	-	.	ID=Dca55548.1.exon3;Parent=Dca55548.1
scaffold775	Augus-PASA	exon	92755	92971	.	-	.	ID=Dca55548.1.exon4;Parent=Dca55548.1
scaffold775	Augus-PASA	exon	93622	93674	.	-	.	ID=Dca55548.1.exon5;Parent=Dca55548.1
scaffold775	Augustus	exon	93754	93817	.	-	.	ID=Dca55548.1.exon6;Parent=Dca55548.1
scaffold775	Augustus	exon	94304	94379	.	-	.	ID=Dca55548.1.exon7;Parent=Dca55548.1
scaffold775	Augustus	exon	94464	94589	.	-	.	ID=Dca55548.1.exon8;Parent=Dca55548.1
scaffold775	Augustus	exon	94717	94782	.	-	.	ID=Dca55548.1.exon9;Parent=Dca55548.1
scaffold775	Augustus	exon	94885	95063	.	-	.	ID=Dca55548.1.exon10;Parent=Dca55548.1
scaffold775	Augustus	exon	95175	95230	.	-	.	ID=Dca55548.1.exon11;Parent=Dca55548.1
scaffold775	Augustus	exon	95928	95977	.	-	.	ID=Dca55548.1.exon12;Parent=Dca55548.1