Dca55552.1
Annotation
- 4-exons
- f-1
- sp|B9IH79_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_824976#GO:0016020#0F0P1C
- sp|Q9SU27_ARATH#At4g12590#Arabidopsis thaliana (Mouse-ear cress)#Name=AT4g12590#GO:0005783;GO:0016020;GO:0005739#0F0P3C
- Repeat List (scaffold775)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55552.1 |
9 |
65 |
88 |
51.13 |
57 |
79 |
1e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SU27_ARATH |
26 |
82 |
246 |
23.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55552.1 |
9 |
65 |
88 |
51.13 |
57 |
79 |
8e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G12590.1 |
26 |
82 |
246 |
23.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold775 |
Augustus |
mRNA |
107715 |
109607 |
. |
- |
. |
ID=Dca55552.1;Parent=Dca55552 |
| scaffold775 |
Augustus |
exon |
107715 |
107819 |
. |
- |
. |
ID=Dca55552.1.exon1;Parent=Dca55552.1 |
| scaffold775 |
Augustus |
exon |
108075 |
108133 |
. |
- |
. |
ID=Dca55552.1.exon2;Parent=Dca55552.1 |
| scaffold775 |
Augustus |
exon |
108277 |
108338 |
. |
- |
. |
ID=Dca55552.1.exon3;Parent=Dca55552.1 |
| scaffold775 |
Augustus |
exon |
109411 |
109607 |
. |
- |
. |
ID=Dca55552.1.exon4;Parent=Dca55552.1 |
