Dca55607.1
Annotation
- 3-exons
- f-1
- sp|B9GRB6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_553283#unknown#0F0P0C
- AT1G04130.1 | Symbols: TPR2, AtTPR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1073465-1075374 FORWARD LENGTH=360
- Repeat List (scaffold7765)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55607.1 |
1 |
209 |
224 |
67.41 |
209 |
72 |
1e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GRB6_POPTR |
36 |
245 |
370 |
56.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55607.1 |
1 |
203 |
224 |
58.92 |
203 |
66 |
3e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G04130.1 |
36 |
238 |
360 |
56.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7765 |
Augustus |
mRNA |
503 |
1381 |
. |
+ |
. |
ID=Dca55607.1;Parent=Dca55607 |
| scaffold7765 |
Augustus |
exon |
503 |
715 |
. |
+ |
. |
ID=Dca55607.1.exon1;Parent=Dca55607.1 |
| scaffold7765 |
Augustus |
exon |
832 |
1023 |
. |
+ |
. |
ID=Dca55607.1.exon2;Parent=Dca55607.1 |
| scaffold7765 |
Augustus |
exon |
1112 |
1381 |
. |
+ |
. |
ID=Dca55607.1.exon3;Parent=Dca55607.1 |
