Dca55641.1
Annotation
- 4-exons
- f-1
- sp|Q688L2_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=P0636E04.8#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7778)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55641.1 |
62 |
306 |
347 |
45.24 |
245 |
54 |
3e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q688L2_ORYSJ |
1222 |
1512 |
1679 |
17.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55641.1 |
65 |
306 |
347 |
29.39 |
242 |
35 |
1e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
136 |
427 |
1262 |
23.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7778 |
Augustus |
mRNA |
5311 |
8081 |
. |
+ |
. |
ID=Dca55641.1;Parent=Dca55641 |
| scaffold7778 |
Augustus |
exon |
5311 |
5513 |
. |
+ |
. |
ID=Dca55641.1.exon1;Parent=Dca55641.1 |
| scaffold7778 |
Augustus |
exon |
6949 |
7203 |
. |
+ |
. |
ID=Dca55641.1.exon2;Parent=Dca55641.1 |
| scaffold7778 |
Augustus |
exon |
7341 |
7795 |
. |
+ |
. |
ID=Dca55641.1.exon3;Parent=Dca55641.1 |
| scaffold7778 |
Augustus |
exon |
7951 |
8081 |
. |
+ |
. |
ID=Dca55641.1.exon4;Parent=Dca55641.1 |
