Dca55648.1
Annotation
- 2-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold778)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55648.1 |
10 |
683 |
740 |
33.91 |
674 |
36 |
9e-114
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
500 |
1162 |
1449 |
45.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55648.1 |
4 |
582 |
740 |
23.24 |
579 |
30 |
1e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
3 |
571 |
857 |
66.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold778 |
Augustus |
mRNA |
22105 |
24655 |
. |
- |
. |
ID=Dca55648.1;Parent=Dca55648 |
| scaffold778 |
Augustus |
exon |
22105 |
22591 |
. |
- |
. |
ID=Dca55648.1.exon1;Parent=Dca55648.1 |
| scaffold778 |
Augustus |
exon |
22920 |
24655 |
. |
- |
. |
ID=Dca55648.1.exon2;Parent=Dca55648.1 |
