Carnation DB

Dca55652.1

Annotation

10-exons
f-1
sp|B9HTB3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_726104#GO:0004316;GO:0051287;GO:0006633#2F1P0C
Os02t0503500-01 Similar to 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast precursor (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase).
Repeat List (scaffold778)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55652.1	11	272	272	81.98	262	85	2e-128
Target_name	Start	End	Length	Cov(%)
sp\|B9HTB3_POPTR	60	324	324	81.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55652.1	11	272	272	70.58	262	73	1e-111
Target_name	Start	End	Length	Cov(%)
Os02t0503500-01	47	312	313	84.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold778	Augus-PASA	mRNA	59228	62702	.	-	.	ID=Dca55652.1;Parent=Dca55652
scaffold778	Augus-PASA	exon	59228	59260	.	-	.	ID=Dca55652.1.exon1;Parent=Dca55652.1
scaffold778	Augus-PASA	exon	59343	59425	.	-	.	ID=Dca55652.1.exon2;Parent=Dca55652.1
scaffold778	Augus-PASA	exon	59594	59687	.	-	.	ID=Dca55652.1.exon3;Parent=Dca55652.1
scaffold778	Augus-PASA	exon	59810	59944	.	-	.	ID=Dca55652.1.exon4;Parent=Dca55652.1
scaffold778	Augus-PASA	exon	60778	60810	.	-	.	ID=Dca55652.1.exon5;Parent=Dca55652.1
scaffold778	Augus-PASA	exon	60895	60989	.	-	.	ID=Dca55652.1.exon6;Parent=Dca55652.1
scaffold778	Augus-PASA	exon	61129	61174	.	-	.	ID=Dca55652.1.exon7;Parent=Dca55652.1
scaffold778	Augus-PASA	exon	61251	61331	.	-	.	ID=Dca55652.1.exon8;Parent=Dca55652.1
scaffold778	Augustus	exon	62097	62130	.	-	.	ID=Dca55652.1.exon9;Parent=Dca55652.1
scaffold778	Augustus	exon	62518	62702	.	-	.	ID=Dca55652.1.exon10;Parent=Dca55652.1