Carnation DB

Dca55704.1

Annotation

5-exons
f-1
sp|F6HPY7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g01780#unknown#0F0P0C
AT3G62770.1 | Symbols: AtATG18a | Transducin/WD40 repeat-like superfamily protein | chr3:23218858-23221110 REVERSE LENGTH=425
Repeat List (scaffold78)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55704.1	1	448	448	71.2	448	70	4e-178
Target_name	Start	End	Length	Cov(%)
sp\|F6HPY7_VITVI	1	439	439	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55704.1	78	448	448	64.28	371	78	3e-170
Target_name	Start	End	Length	Cov(%)
AT3G62770.1	60	425	425	86.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold78	Augus-PASA	mRNA	10869	15432	.	-	.	ID=Dca55704.1;Parent=Dca55704
scaffold78	Augus-PASA	exon	10869	10959	.	-	.	ID=Dca55704.1.exon1;Parent=Dca55704.1
scaffold78	Augus-PASA	exon	11165	11291	.	-	.	ID=Dca55704.1.exon2;Parent=Dca55704.1
scaffold78	Augus-PASA	exon	12718	12922	.	-	.	ID=Dca55704.1.exon3;Parent=Dca55704.1
scaffold78	Augus-PASA	exon	13681	14097	.	-	.	ID=Dca55704.1.exon4;Parent=Dca55704.1
scaffold78	Augus-PASA	exon	14926	15432	.	-	.	ID=Dca55704.1.exon5;Parent=Dca55704.1