Carnation DB

Dca55709.1

Annotation

7-exons
f-1
sp|B9IBI0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_898304#GO:0005634;GO:0043565;GO:0003700;GO:0006351#2F1P1C
sp|B9S3T8_RICCO#Homeobox protein LUMINIDEPENDENS, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0555290#GO:0005634;GO:0043565;GO:0003700;GO:0006351#2F1P1C
Repeat List (scaffold78)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55709.1	1	515	701	33.52	515	44	2e-99
Target_name	Start	End	Length	Cov(%)
sp\|B9IBI0_POPTR	299	727	736	58.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55709.1	1	526	701	28.53	526	36	2e-61
Target_name	Start	End	Length	Cov(%)
AT4G02560.1	309	788	953	50.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold78	Augustus	mRNA	47762	53508	.	-	.	ID=Dca55709.1;Parent=Dca55709
scaffold78	Augustus	exon	47762	48370	.	-	.	ID=Dca55709.1.exon1;Parent=Dca55709.1
scaffold78	Augustus	exon	49045	49622	.	-	.	ID=Dca55709.1.exon2;Parent=Dca55709.1
scaffold78	Augustus	exon	52214	52836	.	-	.	ID=Dca55709.1.exon3;Parent=Dca55709.1
scaffold78	Augustus	exon	52939	53055	.	-	.	ID=Dca55709.1.exon4;Parent=Dca55709.1
scaffold78	Augustus	exon	53141	53181	.	-	.	ID=Dca55709.1.exon5;Parent=Dca55709.1
scaffold78	Augustus	exon	53288	53339	.	-	.	ID=Dca55709.1.exon6;Parent=Dca55709.1
scaffold78	Augustus	exon	53423	53508	.	-	.	ID=Dca55709.1.exon7;Parent=Dca55709.1