Dca55712.1
Annotation
- 3-exons
- f-1
- sp|B9HDM4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561658#unknown#0F0P0C
- AT5G60340.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:24275098-24275891 REVERSE LENGTH=178
- Repeat List (scaffold78)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55712.1 |
3 |
172 |
180 |
77.77 |
170 |
83 |
3e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HDM4_POPTR |
9 |
178 |
178 |
95.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55712.1 |
3 |
169 |
180 |
62.22 |
167 |
68 |
4e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G60340.1 |
11 |
177 |
178 |
93.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold78 |
Augus-PASA |
mRNA |
70261 |
71155 |
. |
- |
. |
ID=Dca55712.1;Parent=Dca55712 |
| scaffold78 |
Augus-PASA |
exon |
70261 |
70471 |
. |
- |
. |
ID=Dca55712.1.exon1;Parent=Dca55712.1 |
| scaffold78 |
Augus-PASA |
exon |
70579 |
70724 |
. |
- |
. |
ID=Dca55712.1.exon2;Parent=Dca55712.1 |
| scaffold78 |
Augustus |
exon |
70970 |
71155 |
. |
- |
. |
ID=Dca55712.1.exon3;Parent=Dca55712.1 |
