Carnation DB

Dca55713.1

Annotation

5-exons
f-1
sp|B9GYS6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830905#unknown#0F0P0C
Os09t0512900-03 Similar to arabinogalactan protein.
Repeat List (scaffold78)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55713.1	1	203	203	80.29	203	80	3e-92
Target_name	Start	End	Length	Cov(%)
sp\|B9GYS6_POPTR	1	202	202	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55713.1	1	202	203	80.78	202	80	1e-90
Target_name	Start	End	Length	Cov(%)
Os09t0512900-03	1	205	207	99.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold78	Augus-PASA	mRNA	73296	75891	.	-	.	ID=Dca55713.1;Parent=Dca55713
scaffold78	Augus-PASA	exon	73296	73404	.	-	.	ID=Dca55713.1.exon1;Parent=Dca55713.1
scaffold78	Augus-PASA	exon	73639	73853	.	-	.	ID=Dca55713.1.exon2;Parent=Dca55713.1
scaffold78	Augus-PASA	exon	73941	74012	.	-	.	ID=Dca55713.1.exon3;Parent=Dca55713.1
scaffold78	Augus-PASA	exon	75136	75241	.	-	.	ID=Dca55713.1.exon4;Parent=Dca55713.1
scaffold78	Augus-PASA	exon	75782	75891	.	-	.	ID=Dca55713.1.exon5;Parent=Dca55713.1