Carnation DB

Dca55750.1

Annotation

18-exons
f-1
sp|G7LJ01_MEDTR#Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_8g018770#GO:0045254;GO:0004742;GO:0006090#1F1P1C
Repeat List (scaffold780)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55750.1	5	542	542	70.66	538	70	0
Target_name	Start	End	Length	Cov(%)
sp\|G7LJ01_MEDTR	9	543	543	98.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55750.1	95	542	542	65.49	448	79	0
Target_name	Start	End	Length	Cov(%)
AT1G54220.1	91	539	539	83.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold780	Augus-PASA	mRNA	32056	38380	.	-	.	ID=Dca55750.1;Parent=Dca55750
scaffold780	Augus-PASA	exon	32056	32126	.	-	.	ID=Dca55750.1.exon1;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	32261	32353	.	-	.	ID=Dca55750.1.exon2;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	32821	32923	.	-	.	ID=Dca55750.1.exon3;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	33021	33116	.	-	.	ID=Dca55750.1.exon4;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	33206	33272	.	-	.	ID=Dca55750.1.exon5;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	33375	33442	.	-	.	ID=Dca55750.1.exon6;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	33676	33751	.	-	.	ID=Dca55750.1.exon7;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	33833	33918	.	-	.	ID=Dca55750.1.exon8;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	34000	34094	.	-	.	ID=Dca55750.1.exon9;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	34564	34636	.	-	.	ID=Dca55750.1.exon10;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	34741	34986	.	-	.	ID=Dca55750.1.exon11;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	35486	35578	.	-	.	ID=Dca55750.1.exon12;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	35668	35742	.	-	.	ID=Dca55750.1.exon13;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	35826	35881	.	-	.	ID=Dca55750.1.exon14;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	36983	37023	.	-	.	ID=Dca55750.1.exon15;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	37220	37308	.	-	.	ID=Dca55750.1.exon16;Parent=Dca55750.1
scaffold780	Augus-PASA	exon	37430	37536	.	-	.	ID=Dca55750.1.exon17;Parent=Dca55750.1
scaffold780	Augustus	exon	38287	38380	.	-	.	ID=Dca55750.1.exon18;Parent=Dca55750.1