Dca55757.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold780)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55757.1 |
1 |
279 |
295 |
60.67 |
279 |
52 |
3e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
408 |
751 |
1717 |
20.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55757.1 |
69 |
137 |
295 |
8.47 |
69 |
37 |
6e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0122300-01 |
77 |
144 |
150 |
45.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold780 |
Augustus |
mRNA |
103756 |
104879 |
. |
- |
. |
ID=Dca55757.1;Parent=Dca55757 |
| scaffold780 |
Augustus |
exon |
103756 |
104243 |
. |
- |
. |
ID=Dca55757.1.exon1;Parent=Dca55757.1 |
| scaffold780 |
Augustus |
exon |
104355 |
104642 |
. |
- |
. |
ID=Dca55757.1.exon2;Parent=Dca55757.1 |
| scaffold780 |
Augustus |
exon |
104768 |
104879 |
. |
- |
. |
ID=Dca55757.1.exon3;Parent=Dca55757.1 |
