Carnation DB

Dca55780.1

Annotation

13-exons
f-1
sp|B9SVC0_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0034590#GO:0016021;GO:0008146#1F0P1C
AT1G08030.1 | Symbols: TPST | tyrosylprotein sulfotransferase | chr1:2489575-2492741 REVERSE LENGTH=500
Repeat List (scaffold781)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55780.1	27	412	446	58.52	386	64	1e-149
Target_name	Start	End	Length	Cov(%)
sp\|B9SVC0_RICCO	24	429	433	93.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55780.1	22	409	446	51.34	388	53	3e-130
Target_name	Start	End	Length	Cov(%)
AT1G08030.1	20	449	500	86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold781	Augustus	mRNA	31235	36189	.	+	.	ID=Dca55780.1;Parent=Dca55780
scaffold781	Augustus	exon	31235	31283	.	+	.	ID=Dca55780.1.exon1;Parent=Dca55780.1
scaffold781	Augustus	exon	31984	32161	.	+	.	ID=Dca55780.1.exon2;Parent=Dca55780.1
scaffold781	Augustus	exon	32263	32334	.	+	.	ID=Dca55780.1.exon3;Parent=Dca55780.1
scaffold781	Augustus	exon	32564	32732	.	+	.	ID=Dca55780.1.exon4;Parent=Dca55780.1
scaffold781	Augustus	exon	32814	32852	.	+	.	ID=Dca55780.1.exon5;Parent=Dca55780.1
scaffold781	Augustus	exon	33073	33219	.	+	.	ID=Dca55780.1.exon6;Parent=Dca55780.1
scaffold781	Augustus	exon	33603	33707	.	+	.	ID=Dca55780.1.exon7;Parent=Dca55780.1
scaffold781	Augustus	exon	33808	33955	.	+	.	ID=Dca55780.1.exon8;Parent=Dca55780.1
scaffold781	Augustus	exon	34235	34281	.	+	.	ID=Dca55780.1.exon9;Parent=Dca55780.1
scaffold781	Augustus	exon	34417	34539	.	+	.	ID=Dca55780.1.exon10;Parent=Dca55780.1
scaffold781	Augustus	exon	34673	34798	.	+	.	ID=Dca55780.1.exon11;Parent=Dca55780.1
scaffold781	Augustus	exon	35018	35116	.	+	.	ID=Dca55780.1.exon12;Parent=Dca55780.1
scaffold781	Augustus	exon	36151	36189	.	+	.	ID=Dca55780.1.exon13;Parent=Dca55780.1
scaffold781	Augustus	mRNA	31235	36189	.	+	.	ID=Dca55780.2;Parent=Dca55780
scaffold781	Augustus	exon	31235	31283	.	+	.	ID=Dca55780.2.exon1;Parent=Dca55780.2
scaffold781	Augustus	exon	31984	32161	.	+	.	ID=Dca55780.2.exon2;Parent=Dca55780.2
scaffold781	Augustus	exon	32263	32334	.	+	.	ID=Dca55780.2.exon3;Parent=Dca55780.2
scaffold781	Augustus	exon	32564	32732	.	+	.	ID=Dca55780.2.exon4;Parent=Dca55780.2
scaffold781	Augustus	exon	32814	32852	.	+	.	ID=Dca55780.2.exon5;Parent=Dca55780.2
scaffold781	Augustus	exon	33073	33219	.	+	.	ID=Dca55780.2.exon6;Parent=Dca55780.2
scaffold781	Augustus	exon	33603	33707	.	+	.	ID=Dca55780.2.exon7;Parent=Dca55780.2
scaffold781	Augustus	exon	33808	33955	.	+	.	ID=Dca55780.2.exon8;Parent=Dca55780.2
scaffold781	Augustus	exon	34235	34281	.	+	.	ID=Dca55780.2.exon9;Parent=Dca55780.2
scaffold781	Augustus	exon	34417	34539	.	+	.	ID=Dca55780.2.exon10;Parent=Dca55780.2
scaffold781	Augustus	exon	34673	34798	.	+	.	ID=Dca55780.2.exon11;Parent=Dca55780.2
scaffold781	Augustus	exon	34997	35116	.	+	.	ID=Dca55780.2.exon12;Parent=Dca55780.2
scaffold781	Augustus	exon	36151	36189	.	+	.	ID=Dca55780.2.exon13;Parent=Dca55780.2