Carnation DB

Dca55782.1

Annotation

5-exons
f-1
sp|B9HTV0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_769111#GO:0016846;GO:0030170#2F0P0C
sp|B9SPI8_RICCO#Alliin lyase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0024350#GO:0047654;GO:0030170#2F0P0C
Repeat List (scaffold781)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55782.1	31	339	405	35.3	309	47	9e-81
Target_name	Start	End	Length	Cov(%)
sp\|B9HTV0_POPTR	6	302	365	81.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55782.1	22	340	405	34.81	319	45	2e-77
Target_name	Start	End	Length	Cov(%)
AT1G23320.1	23	328	388	78.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold781	Augustus	mRNA	54664	58016	.	+	.	ID=Dca55782.1;Parent=Dca55782
scaffold781	Augustus	exon	54664	54752	.	+	.	ID=Dca55782.1.exon1;Parent=Dca55782.1
scaffold781	Augustus	exon	55543	55864	.	+	.	ID=Dca55782.1.exon2;Parent=Dca55782.1
scaffold781	Augustus	exon	55967	56247	.	+	.	ID=Dca55782.1.exon3;Parent=Dca55782.1
scaffold781	Augustus	exon	56374	56684	.	+	.	ID=Dca55782.1.exon4;Parent=Dca55782.1
scaffold781	Augustus	exon	57802	58016	.	+	.	ID=Dca55782.1.exon5;Parent=Dca55782.1