Dca55798.1
Annotation
- 4-exons
- f-1
- sp|Q2QP23_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class, expressed#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g35940#unknown#0F0P0C
- Repeat List (scaffold7815)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55798.1 |
121 |
1201 |
1201 |
49.7 |
1081 |
55 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QP23_ORYSJ |
25 |
1108 |
1114 |
97.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55798.1 |
122 |
882 |
1201 |
27.22 |
761 |
42 |
9e-177
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0208400-02 |
22 |
792 |
829 |
93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7815 |
Augustus |
mRNA |
6105 |
10994 |
. |
+ |
. |
ID=Dca55798.1;Parent=Dca55798 |
| scaffold7815 |
Augustus |
exon |
6105 |
6484 |
. |
+ |
. |
ID=Dca55798.1.exon1;Parent=Dca55798.1 |
| scaffold7815 |
Augustus |
exon |
7615 |
10074 |
. |
+ |
. |
ID=Dca55798.1.exon2;Parent=Dca55798.1 |
| scaffold7815 |
Augustus |
exon |
10148 |
10253 |
. |
+ |
. |
ID=Dca55798.1.exon3;Parent=Dca55798.1 |
| scaffold7815 |
Augustus |
exon |
10335 |
10994 |
. |
+ |
. |
ID=Dca55798.1.exon4;Parent=Dca55798.1 |
