Dca55813.1
Annotation
- 2-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold782)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55813.1 |
22 |
146 |
148 |
52.7 |
125 |
63 |
4e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1169 |
1293 |
1553 |
8.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55813.1 |
35 |
128 |
148 |
29.05 |
94 |
46 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1144 |
1236 |
1539 |
6.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold782 |
Augustus |
mRNA |
53007 |
54090 |
. |
+ |
. |
ID=Dca55813.1;Parent=Dca55813 |
| scaffold782 |
Augustus |
exon |
53007 |
53049 |
. |
+ |
. |
ID=Dca55813.1.exon1;Parent=Dca55813.1 |
| scaffold782 |
Augustus |
exon |
53687 |
54090 |
. |
+ |
. |
ID=Dca55813.1.exon2;Parent=Dca55813.1 |
