Dca55839.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold783)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55839.1 |
1 |
180 |
186 |
71.5 |
180 |
63 |
7e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
682 |
895 |
896 |
23.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55839.1 |
4 |
169 |
186 |
32.79 |
166 |
31 |
4e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1187 |
1384 |
1401 |
14.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold783 |
Augustus |
mRNA |
7481 |
8143 |
. |
+ |
. |
ID=Dca55839.1;Parent=Dca55839 |
| scaffold783 |
Augustus |
exon |
7481 |
7651 |
. |
+ |
. |
ID=Dca55839.1.exon1;Parent=Dca55839.1 |
| scaffold783 |
Augustus |
exon |
7754 |
8143 |
. |
+ |
. |
ID=Dca55839.1.exon2;Parent=Dca55839.1 |
