Dca55842.1
Annotation
- 3-exons
- f-1
- sp|F6HIN6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0042g00180#unknown#0F0P0C
- AT5G08320.1 | Symbols: | CONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). | chr5:2677153-2678603 FORWARD LENGTH=150
- Repeat List (scaffold783)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55842.1 |
11 |
157 |
157 |
60.5 |
147 |
64 |
5e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HIN6_VITVI |
31 |
179 |
179 |
83.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55842.1 |
11 |
156 |
157 |
54.77 |
146 |
59 |
6e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G08320.1 |
3 |
149 |
150 |
98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold783 |
Augus-PASA |
mRNA |
24052 |
27409 |
. |
+ |
. |
ID=Dca55842.1;Parent=Dca55842 |
| scaffold783 |
Augus-PASA |
exon |
24052 |
24106 |
. |
+ |
. |
ID=Dca55842.1.exon1;Parent=Dca55842.1 |
| scaffold783 |
Augus-PASA |
exon |
24399 |
24564 |
. |
+ |
. |
ID=Dca55842.1.exon2;Parent=Dca55842.1 |
| scaffold783 |
Augus-PASA |
exon |
27157 |
27409 |
. |
+ |
. |
ID=Dca55842.1.exon3;Parent=Dca55842.1 |
