Dca55874.1
Annotation
- 3-exons
- f-1
- sp|D7LNC4_ARALL#40S ribosomal protein S20#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_905958#GO:0015935;GO:0003723;GO:0003735;GO:0006412#2F1P1C
- Repeat List (scaffold784)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55874.1 |
1 |
121 |
121 |
89.25 |
121 |
89 |
5e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LNC4_ARALL |
1 |
122 |
122 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55874.1 |
1 |
121 |
121 |
88.42 |
121 |
88 |
2e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G47370.2 |
1 |
122 |
122 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold784 |
Augus-PASA |
mRNA |
15075 |
16375 |
. |
- |
. |
ID=Dca55874.1;Parent=Dca55874 |
| scaffold784 |
Augus-PASA |
exon |
15075 |
15217 |
. |
- |
. |
ID=Dca55874.1.exon1;Parent=Dca55874.1 |
| scaffold784 |
Augus-PASA |
exon |
15372 |
15485 |
. |
- |
. |
ID=Dca55874.1.exon2;Parent=Dca55874.1 |
| scaffold784 |
Augustus |
exon |
16267 |
16375 |
. |
- |
. |
ID=Dca55874.1.exon3;Parent=Dca55874.1 |
