Carnation DB

Dca55875.1

Annotation

7-exons
f-1
sp|B9I4K9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570580#GO:0006884;GO:0006821#0F2P0C
AT5G62290.1 | Symbols: | nucleotide-sensitive chloride conductance regulator (ICln) family protein | chr5:25019568-25020972 FORWARD LENGTH=229
Repeat List (scaffold784)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55875.1	1	224	224	64.28	224	62	1e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9I4K9_POPTR	1	231	231	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55875.1	1	224	224	60.26	224	58	1e-65
Target_name	Start	End	Length	Cov(%)
AT5G62290.1	1	229	229	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold784	Augus-PASA	mRNA	17249	19916	.	-	.	ID=Dca55875.1;Parent=Dca55875
scaffold784	Augus-PASA	exon	17249	17320	.	-	.	ID=Dca55875.1.exon1;Parent=Dca55875.1
scaffold784	Augus-PASA	exon	18358	18425	.	-	.	ID=Dca55875.1.exon2;Parent=Dca55875.1
scaffold784	Augus-PASA	exon	18535	18597	.	-	.	ID=Dca55875.1.exon3;Parent=Dca55875.1
scaffold784	Augus-PASA	exon	18683	18742	.	-	.	ID=Dca55875.1.exon4;Parent=Dca55875.1
scaffold784	Augus-PASA	exon	18848	18968	.	-	.	ID=Dca55875.1.exon5;Parent=Dca55875.1
scaffold784	Augus-PASA	exon	19499	19622	.	-	.	ID=Dca55875.1.exon6;Parent=Dca55875.1
scaffold784	Augus-PASA	exon	19750	19916	.	-	.	ID=Dca55875.1.exon7;Parent=Dca55875.1