Carnation DB

Dca55880.1

Annotation

5-exons
f-1
sp|B9I4J9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570570#GO:0003677#1F0P0C
AT5G62260.1 | Symbols: | AT hook motif DNA-binding family protein | chr5:25009331-25011348 FORWARD LENGTH=404
Repeat List (scaffold784)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55880.1	1	309	354	50.84	309	52	1e-76
Target_name	Start	End	Length	Cov(%)
sp\|B9I4J9_POPTR	1	338	345	97.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55880.1	64	270	354	36.15	207	59	4e-62
Target_name	Start	End	Length	Cov(%)
AT5G62260.1	75	291	404	53.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold784	Augustus	mRNA	43057	45296	.	-	.	ID=Dca55880.1;Parent=Dca55880
scaffold784	Augustus	exon	43057	43377	.	-	.	ID=Dca55880.1.exon1;Parent=Dca55880.1
scaffold784	Augustus	exon	43490	43651	.	-	.	ID=Dca55880.1.exon2;Parent=Dca55880.1
scaffold784	Augustus	exon	43765	43896	.	-	.	ID=Dca55880.1.exon3;Parent=Dca55880.1
scaffold784	Augustus	exon	44001	44068	.	-	.	ID=Dca55880.1.exon4;Parent=Dca55880.1
scaffold784	Augustus	exon	44915	45296	.	-	.	ID=Dca55880.1.exon5;Parent=Dca55880.1