Carnation DB

Dca55890.1

Annotation

12-exons
f-1
sp|D7T2W9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0064g01360#GO:0005524;GO:0031072;GO:0046872;GO:0051082;GO:0006457;GO:0009408#4F2P0C
sp|C4T7Z2_TOBAC#DnaJ-like protein#Nicotiana tabacum (Common tobacco)#Name=NtMPIP1#GO:0005524;GO:0031072;GO:0046872;GO:0051082;GO:0006457;GO:0009408#4F2P0C
Repeat List (scaffold7842)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55890.1	1	341	342	67.83	341	68	8e-131
Target_name	Start	End	Length	Cov(%)
sp\|D7T2W9_VITVI	116	450	451	74.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55890.1	1	342	342	61.4	342	60	4e-119
Target_name	Start	End	Length	Cov(%)
AT5G48030.1	117	456	456	74.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7842	Augustus	mRNA	217	6198	.	+	.	ID=Dca55890.1;Parent=Dca55890
scaffold7842	Augustus	exon	217	300	.	+	.	ID=Dca55890.1.exon1;Parent=Dca55890.1
scaffold7842	Augustus	exon	406	444	.	+	.	ID=Dca55890.1.exon2;Parent=Dca55890.1
scaffold7842	Augustus	exon	688	813	.	+	.	ID=Dca55890.1.exon3;Parent=Dca55890.1
scaffold7842	Augustus	exon	2800	2932	.	+	.	ID=Dca55890.1.exon4;Parent=Dca55890.1
scaffold7842	Augustus	exon	3124	3188	.	+	.	ID=Dca55890.1.exon5;Parent=Dca55890.1
scaffold7842	Augustus	exon	3268	3342	.	+	.	ID=Dca55890.1.exon6;Parent=Dca55890.1
scaffold7842	Augustus	exon	3827	3899	.	+	.	ID=Dca55890.1.exon7;Parent=Dca55890.1
scaffold7842	Augustus	exon	4097	4260	.	+	.	ID=Dca55890.1.exon8;Parent=Dca55890.1
scaffold7842	Augustus	exon	5395	5451	.	+	.	ID=Dca55890.1.exon9;Parent=Dca55890.1
scaffold7842	Augustus	exon	5541	5589	.	+	.	ID=Dca55890.1.exon10;Parent=Dca55890.1
scaffold7842	Augustus	exon	5945	6011	.	+	.	ID=Dca55890.1.exon11;Parent=Dca55890.1
scaffold7842	Augustus	exon	6102	6198	.	+	.	ID=Dca55890.1.exon12;Parent=Dca55890.1