Carnation DB

Dca55904.1

Annotation

5-exons
f-1
sp|D7T7N4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0039g01860#GO:0003676;GO:0000166#2F0P0C
sp|B9S228_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1326600#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold785)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55904.1	1	253	253	71.93	253	71	3e-103
Target_name	Start	End	Length	Cov(%)
sp\|D7T7N4_VITVI	1	257	277	92.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55904.1	3	251	253	65.61	249	65	3e-88
Target_name	Start	End	Length	Cov(%)
AT5G16840.2	5	255	260	96.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold785	Augus-PASA	mRNA	19460	20845	.	+	.	ID=Dca55904.1;Parent=Dca55904
scaffold785	Augus-PASA	exon	19460	19465	.	+	.	ID=Dca55904.1.exon1;Parent=Dca55904.1
scaffold785	Augus-PASA	exon	19713	19816	.	+	.	ID=Dca55904.1.exon2;Parent=Dca55904.1
scaffold785	Augus-PASA	exon	19914	19989	.	+	.	ID=Dca55904.1.exon3;Parent=Dca55904.1
scaffold785	Augus-PASA	exon	20188	20259	.	+	.	ID=Dca55904.1.exon4;Parent=Dca55904.1
scaffold785	Augus-PASA	exon	20342	20845	.	+	.	ID=Dca55904.1.exon5;Parent=Dca55904.1