Carnation DB

Dca55906.1

Annotation

7-exons
f-1
sp|B4FXG3_MAIZE#Putative uncharacterized protein#Zea mays (Maize)#unknown#GO:0016020#0F0P1C
AT5G16890.1 | Symbols: | Exostosin family protein | chr5:5551664-5554741 FORWARD LENGTH=511
Repeat List (scaffold785)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55906.1	22	511	517	63.63	490	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B4FXG3_MAIZE	26	494	497	94.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55906.1	10	507	517	62.28	498	65	0
Target_name	Start	End	Length	Cov(%)
AT5G16890.1	3	497	511	96.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold785	Augustus	mRNA	23309	27321	.	+	.	ID=Dca55906.1;Parent=Dca55906
scaffold785	Augustus	exon	23309	23992	.	+	.	ID=Dca55906.1.exon1;Parent=Dca55906.1
scaffold785	Augustus	exon	24089	24246	.	+	.	ID=Dca55906.1.exon2;Parent=Dca55906.1
scaffold785	Augustus	exon	24353	24616	.	+	.	ID=Dca55906.1.exon3;Parent=Dca55906.1
scaffold785	Augus-PASA	exon	24795	24933	.	+	.	ID=Dca55906.1.exon4;Parent=Dca55906.1
scaffold785	Augus-PASA	exon	26668	26778	.	+	.	ID=Dca55906.1.exon5;Parent=Dca55906.1
scaffold785	Augus-PASA	exon	27038	27106	.	+	.	ID=Dca55906.1.exon6;Parent=Dca55906.1
scaffold785	Augus-PASA	exon	27193	27321	.	+	.	ID=Dca55906.1.exon7;Parent=Dca55906.1