Carnation DB

Dca55909.1

Annotation

13-exons
f-1
sp|A9PFB9_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0016021;GO:0022891#1F0P1C
AT5G17010.1 | Symbols: | Major facilitator superfamily protein | chr5:5587851-5592332 REVERSE LENGTH=503
Repeat List (scaffold785)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55909.1	7	513	513	71.53	507	73	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PFB9_POPTR	6	502	502	99

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55909.1	6	513	513	66.08	508	67	0
Target_name	Start	End	Length	Cov(%)
AT5G17010.1	7	503	503	98.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold785	Augus-PASA	mRNA	34760	38228	.	-	.	ID=Dca55909.1;Parent=Dca55909
scaffold785	Augus-PASA	exon	34760	34891	.	-	.	ID=Dca55909.1.exon1;Parent=Dca55909.1
scaffold785	Augus-PASA	exon	35184	35321	.	-	.	ID=Dca55909.1.exon2;Parent=Dca55909.1
scaffold785	Augus-PASA	exon	35517	35615	.	-	.	ID=Dca55909.1.exon3;Parent=Dca55909.1
scaffold785	Augus-PASA	exon	35870	35950	.	-	.	ID=Dca55909.1.exon4;Parent=Dca55909.1
scaffold785	Augus-PASA	exon	36324	36386	.	-	.	ID=Dca55909.1.exon5;Parent=Dca55909.1
scaffold785	Augus-PASA	exon	36468	36515	.	-	.	ID=Dca55909.1.exon6;Parent=Dca55909.1
scaffold785	Augus-PASA	exon	36608	36976	.	-	.	ID=Dca55909.1.exon7;Parent=Dca55909.1
scaffold785	Augus-PASA	exon	37088	37189	.	-	.	ID=Dca55909.1.exon8;Parent=Dca55909.1
scaffold785	Augustus	exon	37293	37484	.	-	.	ID=Dca55909.1.exon9;Parent=Dca55909.1
scaffold785	Augustus	exon	37579	37638	.	-	.	ID=Dca55909.1.exon10;Parent=Dca55909.1
scaffold785	Augustus	exon	37747	37825	.	-	.	ID=Dca55909.1.exon11;Parent=Dca55909.1
scaffold785	Augustus	exon	37934	38061	.	-	.	ID=Dca55909.1.exon12;Parent=Dca55909.1
scaffold785	Augustus	exon	38178	38228	.	-	.	ID=Dca55909.1.exon13;Parent=Dca55909.1