Carnation DB

Dca55921.1

Annotation

5-exons
f-1
sp|F6H4D4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0031g02180#GO:0005524;GO:0016891;GO:0004674;GO:0006397#3F1P0C
AT2G17520.1 | Symbols: IRE1A, ATIRE1-2, IRE1-2 | Endoribonuclease/protein kinase IRE1-like | chr2:7617504-7620929 FORWARD LENGTH=841
Repeat List (scaffold7852)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55921.1	2	730	734	53.67	729	51	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H4D4_VITVI	158	924	926	82.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55921.1	3	734	734	47.27	732	47	0
Target_name	Start	End	Length	Cov(%)
AT2G17520.1	157	841	841	81.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7852	Augus-PASA	mRNA	5721	9471	.	+	.	ID=Dca55921.1;Parent=Dca55921
scaffold7852	Augus-PASA	exon	5721	7039	.	+	.	ID=Dca55921.1.exon1;Parent=Dca55921.1
scaffold7852	Augus-PASA	exon	7230	7417	.	+	.	ID=Dca55921.1.exon2;Parent=Dca55921.1
scaffold7852	Augus-PASA	exon	7704	7950	.	+	.	ID=Dca55921.1.exon3;Parent=Dca55921.1
scaffold7852	Augus-PASA	exon	8443	8746	.	+	.	ID=Dca55921.1.exon4;Parent=Dca55921.1
scaffold7852	Augus-PASA	exon	9325	9471	.	+	.	ID=Dca55921.1.exon5;Parent=Dca55921.1