Dca55950.1
Annotation
- 4-exons
- f-1
- sp|B9IAY8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573159#GO:0005634;GO:0043565;GO:0003700#2F0P1C
- AT4G12750.1 | Symbols: | Homeodomain-like transcriptional regulator | chr4:7498009-7503920 REVERSE LENGTH=1131
- Repeat List (scaffold786)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55950.1 |
5 |
378 |
384 |
56.77 |
374 |
59 |
8e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IAY8_POPTR |
778 |
1152 |
1152 |
32.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55950.1 |
21 |
378 |
384 |
49.73 |
358 |
54 |
8e-108
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G12750.1 |
761 |
1110 |
1131 |
30.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold786 |
Augustus |
mRNA |
53028 |
55119 |
. |
- |
. |
ID=Dca55950.1;Parent=Dca55950 |
| scaffold786 |
Augustus |
exon |
53028 |
53234 |
. |
- |
. |
ID=Dca55950.1.exon1;Parent=Dca55950.1 |
| scaffold786 |
Augustus |
exon |
53370 |
53474 |
. |
- |
. |
ID=Dca55950.1.exon2;Parent=Dca55950.1 |
| scaffold786 |
Augustus |
exon |
54129 |
54746 |
. |
- |
. |
ID=Dca55950.1.exon3;Parent=Dca55950.1 |
| scaffold786 |
Augustus |
exon |
54895 |
55119 |
. |
- |
. |
ID=Dca55950.1.exon4;Parent=Dca55950.1 |
