Carnation DB

Dca55951.1

Annotation

13-exons
f-1
sp|F6H9W6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0085g00350#GO:0005634;GO:0043565;GO:0003700#2F0P1C
AT4G12750.1 | Symbols: | Homeodomain-like transcriptional regulator | chr4:7498009-7503920 REVERSE LENGTH=1131
Repeat List (scaffold786)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55951.1	8	672	694	46.97	665	42	6e-134
Target_name	Start	End	Length	Cov(%)
sp\|F6H9W6_VITVI	9	756	1185	63.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55951.1	16	685	694	39.91	670	37	1e-106
Target_name	Start	End	Length	Cov(%)
AT4G12750.1	1	724	1131	64.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold786	Augustus	mRNA	55165	63441	.	-	.	ID=Dca55951.1;Parent=Dca55951
scaffold786	Augustus	exon	55165	55305	.	-	.	ID=Dca55951.1.exon1;Parent=Dca55951.1
scaffold786	Augustus	exon	56085	56537	.	-	.	ID=Dca55951.1.exon2;Parent=Dca55951.1
scaffold786	Augustus	exon	57742	57864	.	-	.	ID=Dca55951.1.exon3;Parent=Dca55951.1
scaffold786	Augustus	exon	58416	58556	.	-	.	ID=Dca55951.1.exon4;Parent=Dca55951.1
scaffold786	Augustus	exon	59120	59206	.	-	.	ID=Dca55951.1.exon5;Parent=Dca55951.1
scaffold786	Augustus	exon	59836	59936	.	-	.	ID=Dca55951.1.exon6;Parent=Dca55951.1
scaffold786	Augustus	exon	60038	60251	.	-	.	ID=Dca55951.1.exon7;Parent=Dca55951.1
scaffold786	Augustus	exon	60339	60401	.	-	.	ID=Dca55951.1.exon8;Parent=Dca55951.1
scaffold786	Augustus	exon	60549	60683	.	-	.	ID=Dca55951.1.exon9;Parent=Dca55951.1
scaffold786	Augustus	exon	60799	60912	.	-	.	ID=Dca55951.1.exon10;Parent=Dca55951.1
scaffold786	Augustus	exon	61022	61080	.	-	.	ID=Dca55951.1.exon11;Parent=Dca55951.1
scaffold786	Augustus	exon	62430	62786	.	-	.	ID=Dca55951.1.exon12;Parent=Dca55951.1
scaffold786	Augustus	exon	63345	63441	.	-	.	ID=Dca55951.1.exon13;Parent=Dca55951.1